STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR83Mitogen-activated protein kinase organizer 1. (325 aa)    
Predicted Functional Partners:
SF3B4
Splicing factor 3B subunit 4.
    
 
 0.958
LAMTOR3
Ragulator complex protein LAMTOR3.
   
 0.936
PRPF8
Pre-mRNA-processing-splicing factor 8.
    
   0.931
GPATCH1
G patch domain-containing protein 1.
    
 
 0.925
LUC7L
Putative RNA-binding protein Luc7-like 1 isoform X1.
      
 0.737
CCDC12
Coiled-coil domain-containing protein 12.
    
 
 0.667
DHPS
Deoxyhypusine synthase.
   
  
 0.654
CWF19L2
CWF19-like protein 2.
   
 
 0.587
OGFOD2
2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 isoform X1.
   
  
 0.573
AQR
Intron-binding protein aquarius.
    
 
 0.572
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.