STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000020986annotation not available (172 aa)    
Predicted Functional Partners:
ERI1
3'-5' exoribonuclease 1.
   
 
 0.828
MIF4GD
MIF4G domain-containing protein.
    
 
 0.817
LSM10
U7 snRNA-associated Sm-like protein LSm10 isoform X1.
   
 
 0.775
NCBP1
Nuclear cap-binding protein subunit 1.
   
 0.766
LSM11
LOW QUALITY PROTEIN: U7 snRNA-associated Sm-like protein LSm11.
     
 0.760
CTIF
CBP80/20-dependent translation initiation factor isoform X1.
    
 
 0.724
ALYREF
THO complex subunit 4.
   
 
 0.673
SNRPD1
Small nuclear ribonucleoprotein Sm D1 isoform X1.
   
 
 0.646
MCM7
DNA replication licensing factor MCM7.
   
  
 0.643
SNRPD3
Small nuclear ribonucleoprotein Sm D3.
   
 
 0.627
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.