STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC4A8Solute carrier family 4 (sodium bicarbonate cotransporter), member 8. (1092 aa)    
Predicted Functional Partners:
IFT172
Intraflagellar transport protein 172 homolog isoform X1.
      
 0.685
DNALI1
Axonemal dynein light intermediate polypeptide 1 isoform X1.
   
  
 0.614
CYB5D1
Cytochrome b5 domain-containing protein 1.
   
  
 0.599
TTC6
Tetratricopeptide repeat domain 6.
   
    0.591
ENSPCIP00000023932
Uncharacterized protein C14orf79 homolog isoform X1.
   
    0.591
SLC26A7
Solute carrier family 26 (anion exchange transporter), member 7.
      
 0.555
SLC22A15
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 15.
      
 0.555
VDAC2
Voltage-dependent anion-selective channel protein 2.
      
 0.514
SLC12A2
Solute carrier family 12 member 2.
     
 0.464
SRGAP1
LOW QUALITY PROTEIN: SLIT-ROBO Rho GTPase-activating protein 1.
     
 0.436
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.