STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDSL-serine dehydratase/L-threonine deaminase isoform X1. (324 aa)    
Predicted Functional Partners:
CBS
Cystathionine beta-synthase isoform X1.
  
 
 0.965
SDSL
L-serine/L-threonine ammonia-lyase.
  
  
 
0.954
SHMT1
LOW QUALITY PROTEIN: serine hydroxymethyltransferase, cytosolic.
     
 0.947
SHMT2
Serine hydroxymethyltransferase, mitochondrial.
     
 0.947
AGXT
Alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase.
  
 0.942
SRR
Serine racemase.
  
  
0.936
PSPH
Phosphoserine phosphatase.
    
 0.931
ENSPCIP00000005810
L-threonine 3-dehydrogenase, mitochondrial-like.
   
 
 0.922
ENSPCIP00000000004
Uncharacterized protein LOC110221504 isoform X1.
  
 
0.921
BCAT1
Branched-chain-amino-acid aminotransferase, cytosolic isoform X1.
  
 
 0.898
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.