STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGS1Trimethylguanosine synthase 1. (818 aa)    
Predicted Functional Partners:
SNRPD2
Small nuclear ribonucleoprotein Sm D2.
    
 0.924
ENSPCIP00000041923
annotation not available
    
 0.924
ENSPCIP00000022515
annotation not available
    
  0.918
SNRPG
Small nuclear ribonucleoprotein G.
    
  0.918
ENSPCIP00000022671
annotation not available
    
  0.865
ENSPCIP00000022696
annotation not available
    
  0.865
SNRPF
LOW QUALITY PROTEIN: small nuclear ribonucleoprotein F.
    
  0.865
NCOA6
Nuclear receptor coactivator 6 isoform X1.
    
 0.802
SNRPD3
Small nuclear ribonucleoprotein Sm D3.
    
 0.764
ENSPCIP00000014976
annotation not available
    
  0.749
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.