STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JAG2LOW QUALITY PROTEIN: protein jagged-2. (1234 aa)    
Predicted Functional Partners:
NOTCH1
LOW QUALITY PROTEIN: neurogenic locus notch homolog protein 1.
   
0.997
NOTCH3
Neurogenic locus notch homolog protein 3 isoform X1.
   
0.991
NOTCH2
LOW QUALITY PROTEIN: neurogenic locus notch homolog protein 2.
   
0.986
NOTCH4
Neurogenic locus notch homolog protein 4.
    
0.976
JAG1
Protein jagged-1.
  
 
0.953
RBPJ
Recombining binding protein suppressor of hairless isoform X1.
    
 0.722
SUPT6H
LOW QUALITY PROTEIN: transcription elongation factor SPT6.
   
 
 0.583
SRRT
Serrate RNA effector molecule homolog isoform X1.
      
 0.552
PCF11
Pre-mRNA cleavage complex 2 protein Pcf11.
     
 0.552
DLL4
Delta-like protein 4 isoform X1.
     
0.547
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.