STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGMATAgmatinase, mitochondrial. (396 aa)    
Predicted Functional Partners:
SRM
Spermidine synthase.
  
 
 0.982
AZIN2
LOW QUALITY PROTEIN: antizyme inhibitor 2.
  
 
 0.973
ENSPCIP00000030187
Antizyme inhibitor 2-like.
  
 
 0.963
ODC1
Ornithine decarboxylase.
  
 
 0.963
OAT
Ornithine aminotransferase, mitochondrial.
  
 0.939
AOC1
Amiloride-sensitive amine oxidase [copper-containing].
     
 0.928
SAT1
Diamine N-acetyltransferase.
  
 
 0.920
SAT2
Diamine acetyltransferase 2 isoform X1.
  
 
 0.920
SATL1
Spermidine/spermine N(1)-acetyltransferase-like protein 1.
  
 
 0.920
OTC
Ornithine carbamoyltransferase, mitochondrial isoform X1.
   
 0.879
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.