STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDXDC1LOW QUALITY PROTEIN: pyridoxal-dependent decarboxylase domain-containing protein 1. (935 aa)    
Predicted Functional Partners:
PPP1R35
Protein phosphatase 1 regulatory subunit 35.
      
 0.605
BAHD1
Bromo adjacent homology domain-containing 1 protein.
      
 0.565
BFAR
LOW QUALITY PROTEIN: bifunctional apoptosis regulator.
      
 0.563
NTAN1
LOW QUALITY PROTEIN: protein N-terminal asparagine amidohydrolase.
      
 0.563
PAGR1
PAXIP1-associated glutamate-rich protein 1.
      
 0.563
RRN3
RNA polymerase I-specific transcription initiation factor RRN3.
      
 0.558
CCDC6
Coiled-coil domain-containing protein 6.
      
 0.558
RGL2
LOW QUALITY PROTEIN: ral guanine nucleotide dissociation stimulator-like 2.
      
 0.558
TATDN2
LOW QUALITY PROTEIN: putative deoxyribonuclease TATDN2.
      
 0.549
THRAP3
Thyroid hormone receptor-associated protein 3.
      
 0.515
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.