STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF103E3 ubiquitin-protein ligase RNF103. (685 aa)    
Predicted Functional Partners:
CHMP3
Charged multivesicular body protein 3.
 
    
 0.812
RNF145
RING finger protein 145.
    
 
 0.482
TRIP12
E3 ubiquitin-protein ligase TRIP12 isoform X1.
   
 
 0.479
UBE2K
Ubiquitin-conjugating enzyme (huntingtin interacting protein 2).
   
 0.426
RWDD2A
RWD domain-containing protein 2A.
      
 0.424
RAPSN
43 kDa receptor-associated protein of the synapse isoform X1.
      
 0.414
DENND11
DENN domain containing 11.
      
 0.408
RPS27A
Ubiquitin-small subunit ribosomal protein S27Ae.
    
 0.407
ENSPCIP00000040403
annotation not available
    
 0.407
ENSPCIP00000045070
annotation not available
    
 0.407
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.