STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARFGAP1ADP-ribosylation factor GTPase-activating protein 1 isoform X1. (431 aa)    
Predicted Functional Partners:
GBF1
Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1.
    
 0.898
ARFGAP3
ADP-ribosylation factor GTPase-activating protein 2/3.
   
0.893
ARFGAP2
ADP-ribosylation factor GTPase-activating protein 2 isoform X1.
   
0.893
COPB2
Coatomer subunit beta.
    
 0.847
COPE
Coatomer subunit epsilon.
   
 0.804
COPB1
Coatomer subunit beta.
    
 0.781
ARF6
ADP-ribosylation factor 6.
    
 0.770
ARCN1
Coatomer subunit delta.
   
 0.768
SEC22B
Vesicle-trafficking protein SEC22b.
   
 
 0.767
BET1
Blocked early in transport 1.
     
 0.755
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.