STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLEC11Collectin subfamily member 11. (271 aa)    
Predicted Functional Partners:
COLEC10
Collectin sub-family member 10.
  
0.895
ENSPCIP00000034101
Mannan-binding lectin serine protease 1-like.
    
 0.854
MASP2
Mannan-binding lectin serine protease 2 isoform X1.
    
 0.738
ENSPCIP00000042882
annotation not available
   
 0.697
C1S
Complement component 1, s subcomponent.
    
 0.612
C1R
LOW QUALITY PROTEIN: complement C1r subcomponent.
    
 0.611
FCN1
Ficolin-2.
   
 0.578
RPS7
LOW QUALITY PROTEIN: 40S ribosomal protein S7.
 
  
   0.576
C1RL
Complement C1r subcomponent-like protein isoform X1.
    
 0.516
COL23A1
Collagen alpha-1(XXIII) chain isoform X1.
  
 
  0.498
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.