STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB3DRas-related protein Rab-3D isoform X1. (257 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis protein 2 isoform X1.
    
 0.988
RABGGTA
Geranylgeranyl transferase type-2 subunit alpha isoform X1.
    
 0.732
CASK
Calcium/calmodulin-dependent serine protein kinase.
   
 0.699
SNAP25
Synaptosomal-associated protein 25 isoform X1.
   
 0.675
SYT2
Synaptotagmin-2.
   
 0.666
SYT1
Synaptotagmin-1 isoform X1.
   
 0.666
SLC18A3
Vesicular acetylcholine transporter.
   
 
 0.620
CRACR2B
EF-hand calcium-binding domain-containing protein 4A isoform X1.
 
    
 0.618
MADD
LOW QUALITY PROTEIN: MAP kinase-activating death domain protein.
    
 0.586
SLC32A1
Solute carrier family 32 (vesicular inhibitory amino acid transporter).
   
 
 0.579
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.