STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP8B4Probable phospholipid-transporting ATPase IM isoform X1. (1191 aa)    
Predicted Functional Partners:
DEPDC7
DEP domain-containing protein 7.
      
 0.582
FLRT3
LOW QUALITY PROTEIN: leucine-rich repeat transmembrane protein FLRT3.
    
 
 0.550
TMEM30A
Cell cycle control protein 50A.
   
 0.549
TMEM30B
Transmembrane protein 30B.
   
 0.549
ENSPCIP00000053041
annotation not available
   
 0.549
RPN2
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 isoform X1.
   
 
 0.492
ABTB2
Ankyrin repeat and BTB/POZ domain-containing protein 2.
     
 0.471
PLN
Cardiac phospholamban.
    
 0.464
FXYD2
Sodium/potassium-transporting ATPase subunit gamma isoform X1.
    
 0.420
CCDC47
Coiled-coil domain-containing protein 47.
   
  0.412
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.