STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TLCD5Transmembrane protein 136. (245 aa)    
Predicted Functional Partners:
LOXL1
Lysyl oxidase-like protein 1.
      
 0.584
TNIK
TRAF2 and NCK-interacting protein kinase isoform X1.
      
 0.555
RBMS3
RNA-binding motif, single-stranded-interacting protein 3 isoform X1.
      
 0.553
ZNRF2
E3 ubiquitin-protein ligase ZNRF1/2.
      
 0.485
SORBS2
Sorbin and SH3 domain containing 2.
      
 0.476
ZMIZ1
Zinc finger MIZ domain-containing protein 1 isoform X1.
      
 0.461
TTLL10
Inactive polyglycylase TTLL10 isoform X1.
      
 0.461
RBFOX1
RNA binding fox-1 homolog 1.
      
 0.410
SSH3
Protein phosphatase Slingshot homolog 3.
      
 0.408
POMP
Proteasome maturation protein.
      
 0.400
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.