STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRTNSprT-like domain-containing protein Spartan. (253 aa)    
Predicted Functional Partners:
PCNA
Proliferating cell nuclear antigen.
   
  0.964
VCP
Transitional endoplasmic reticulum ATPase isoform X1.
   
 0.907
ENSPCIP00000005621
annotation not available
   
    0.828
ENSPCIP00000008619
Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2-like isoform X1.
   
    0.828
UFD1
Ubiquitin fusion degradation protein 1 homolog.
    
 0.803
SPATA5L1
Spermatogenesis associated 5 like 1.
   
 0.786
SPATA5
Spermatogenesis-associated protein 5 isoform X1.
   
 0.786
RFC1
Replication factor C subunit 1 isoform X1.
   
 0.770
PPP2R3B
Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X1.
   
    0.768
PPP2R3A
LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha.
   
    0.768
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.