STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLHDC8BKelch domain-containing protein 8B. (354 aa)    
Predicted Functional Partners:
TRAPPC6B
Trafficking protein particle complex subunit 6B.
   
  
 0.573
SIPA1L2
Signal-induced proliferation-associated 1-like protein 2 isoform X1.
   
  
 0.569
RRP36
Ribosomal RNA processing 36.
      
 0.558
RAB11FIP3
Rab11 family-interacting protein 3 isoform X1.
      
 0.558
PRR35
Proline-rich protein 35.
      
 0.556
KCNG3
Potassium voltage-gated channel subfamily G member 3 isoform X1.
      
 0.556
TOGARAM1
LOW QUALITY PROTEIN: crescerin-1.
      
 0.517
ENSPCIP00000047676
annotation not available
  
 
 0.516
SPATA48
Spermatogenesis associated 48.
      
 0.513
TIGD3
Tigger transposable element-derived protein 3.
   
  
 0.485
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.