STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYOD1Myoblast determination protein 1. (321 aa)    
Predicted Functional Partners:
TBP
Transcription initiation factor TFIID TATA-box-binding protein.
    
 0.914
TBPL2
Transcription initiation factor TFIID TATA-box-binding protein.
    
 0.914
TCF3
Transcription factor E2-alpha isoform X1.
   
 0.912
TBPL1
Transcription initiation factor TFIID TATA-box-binding protein.
    
 0.905
EP300
E1A binding protein p300.
    
 
 0.857
TCF12
Transcription factor 12 isoform X1.
   
 0.800
TCF4
Transcription factor 4 isoform X1.
   
 0.800
MEF2D
Myocyte enhancer factor 2D.
    
 0.766
MEF2A
Myocyte enhancer factor 2A.
    
 0.751
ID1
DNA-binding protein inhibitor ID-1.
    
 
 0.742
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.