STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPSB1SPRY domain-containing SOCS box protein 1/4. (273 aa)    
Predicted Functional Partners:
CUL5
Cullin 5.
    
 0.719
MYCBP2
E3 ubiquitin-protein ligase MYCBP2 isoform X1.
    
 
 0.710
ENSPCIP00000000460
annotation not available
    
 0.696
ENSPCIP00000011368
annotation not available
    
 0.696
ELOC
Elongin-C.
    
 0.696
ENSPCIP00000025962
annotation not available
    
 0.696
CUL1
Cullin 1.
   
 0.557
CCDC22
Coiled-coil domain-containing protein 22 isoform X1.
   
 
  0.541
DDX3X
ATP-dependent RNA helicase DDX3X isoform X1.
   
 
 0.533
DDX4
LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX4.
   
 
 0.533
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.