GCN1 protein (Phascolarctos cinereus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

GCN1

LOW QUALITY PROTEIN: eIF-2-alpha kinase activator GCN1. (2672 aa)

Predicted Functional Partners:

ABCF3

0.987

DRG2

0.947

RPL19

0.938

RPL5

0.900

RPL6

0.890

RPS20

0.886

RPL4

0.883

RPS7

0.883

EEF2

0.881

EIF2AK4

0.874

Your Current Organism:

Phascolarctos cinereus

NCBI taxonomy Id: 38626
Other names: P. cinereus, koala

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCF3	DRG2	ENSPCIP00000034654	ENSPCIP00000037111	ATP-binding cassette sub-family F member 3 isoform X1.	Developmentally-regulated GTP-binding protein 2.	0.528
ABCF3	EEF2	ENSPCIP00000034654	ENSPCIP00000034340	ATP-binding cassette sub-family F member 3 isoform X1.	Elongation factor 2.	0.754
ABCF3	EIF2AK4	ENSPCIP00000034654	ENSPCIP00000034092	ATP-binding cassette sub-family F member 3 isoform X1.	Eukaryotic translation initiation factor 2-alpha kinase 4.	0.756
ABCF3	GCN1	ENSPCIP00000034654	ENSPCIP00000024947	ATP-binding cassette sub-family F member 3 isoform X1.	LOW QUALITY PROTEIN: eIF-2-alpha kinase activator GCN1.	0.987
ABCF3	RPL4	ENSPCIP00000034654	ENSPCIP00000008192	ATP-binding cassette sub-family F member 3 isoform X1.	Large subunit ribosomal protein L4e.	0.658
ABCF3	RPL5	ENSPCIP00000034654	ENSPCIP00000017899	ATP-binding cassette sub-family F member 3 isoform X1.	60S ribosomal protein L5 isoform X1.	0.829
ABCF3	RPL6	ENSPCIP00000034654	ENSPCIP00000025090	ATP-binding cassette sub-family F member 3 isoform X1.	Large subunit ribosomal protein L6e.	0.421
ABCF3	RPS20	ENSPCIP00000034654	ENSPCIP00000014842	ATP-binding cassette sub-family F member 3 isoform X1.	LOW QUALITY PROTEIN: 40S ribosomal protein S20.	0.643
ABCF3	RPS7	ENSPCIP00000034654	ENSPCIP00000022668	ATP-binding cassette sub-family F member 3 isoform X1.	LOW QUALITY PROTEIN: 40S ribosomal protein S7.	0.446
DRG2	ABCF3	ENSPCIP00000037111	ENSPCIP00000034654	Developmentally-regulated GTP-binding protein 2.	ATP-binding cassette sub-family F member 3 isoform X1.	0.528
DRG2	GCN1	ENSPCIP00000037111	ENSPCIP00000024947	Developmentally-regulated GTP-binding protein 2.	LOW QUALITY PROTEIN: eIF-2-alpha kinase activator GCN1.	0.947
DRG2	RPL19	ENSPCIP00000037111	ENSPCIP00000003830	Developmentally-regulated GTP-binding protein 2.	Large subunit ribosomal protein L19e.	0.446
DRG2	RPL4	ENSPCIP00000037111	ENSPCIP00000008192	Developmentally-regulated GTP-binding protein 2.	Large subunit ribosomal protein L4e.	0.526
DRG2	RPL5	ENSPCIP00000037111	ENSPCIP00000017899	Developmentally-regulated GTP-binding protein 2.	60S ribosomal protein L5 isoform X1.	0.678
DRG2	RPL6	ENSPCIP00000037111	ENSPCIP00000025090	Developmentally-regulated GTP-binding protein 2.	Large subunit ribosomal protein L6e.	0.565
DRG2	RPS20	ENSPCIP00000037111	ENSPCIP00000014842	Developmentally-regulated GTP-binding protein 2.	LOW QUALITY PROTEIN: 40S ribosomal protein S20.	0.682
DRG2	RPS7	ENSPCIP00000037111	ENSPCIP00000022668	Developmentally-regulated GTP-binding protein 2.	LOW QUALITY PROTEIN: 40S ribosomal protein S7.	0.567
EEF2	ABCF3	ENSPCIP00000034340	ENSPCIP00000034654	Elongation factor 2.	ATP-binding cassette sub-family F member 3 isoform X1.	0.754
EEF2	EIF2AK4	ENSPCIP00000034340	ENSPCIP00000034092	Elongation factor 2.	Eukaryotic translation initiation factor 2-alpha kinase 4.	0.643
EEF2	GCN1	ENSPCIP00000034340	ENSPCIP00000024947	Elongation factor 2.	LOW QUALITY PROTEIN: eIF-2-alpha kinase activator GCN1.	0.881