STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC27A1Solute carrier family 27 (fatty acid transporter), member 1/4. (671 aa)    
Predicted Functional Partners:
SLC27A4
LOW QUALITY PROTEIN: long-chain fatty acid transport protein 4.
  
  
0.911
AASDH
Acyl-CoA synthetase family member 4 isoform X1.
  
 0.800
HSDL2
Hydroxysteroid dehydrogenase-like protein 2 isoform X1.
  
 0.654
ENSPCIP00000043383
annotation not available
  
 0.654
GOT2
LOW QUALITY PROTEIN: aspartate aminotransferase, mitochondrial.
    
 
 0.598
NUP93
Nuclear pore complex protein Nup93 isoform X1.
   
 0.579
NUP205
Nuclear pore complex protein Nup205 isoform X1.
   
 0.576
PEX11A
Peroxisomal membrane protein 11A isoform X1.
    
 
 0.575
MED23
Mediator of RNA polymerase II transcription subunit 23 isoform X1.
   
 0.571
SCARB1
Scavenger receptor class B member 1 isoform X1.
     
 0.564
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.