STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABL3Rab-like protein 3. (236 aa)    
Predicted Functional Partners:
RABGGTA
Geranylgeranyl transferase type-2 subunit alpha isoform X1.
      
 0.626
RAB3IP
LOW QUALITY PROTEIN: rab-3A-interacting protein.
      
 0.606
RABGEF1
Rab5 GDP/GTP exchange factor isoform X1.
   
 0.587
GTF2E1
Transcription initiation factor TFIIE subunit alpha.
   
  
 0.586
RAB24
Ras-related protein Rab-24 isoform X1.
   
  
 0.576
RAB3GAP1
Rab3 GTPase-activating protein catalytic subunit isoform X1.
      
 0.562
HSPA9
Stress-70 protein, mitochondrial.
  
 0.560
RABL6
Rab-like protein 6.
      
 0.559
SPRYD3
SPRY domain-containing protein 3.
      
 0.558
HSPA4L
Heat shock 70 kDa protein 4L.
  
 0.557
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.