STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERPINF1Pigment epithelium-derived factor. (449 aa)    
Predicted Functional Partners:
LRP5
Low density lipoprotein receptor-related protein 5/6.
    
 0.928
LRP6
Low-density lipoprotein receptor-related protein 6 isoform X1.
    
 0.920
F2
Coagulation factor II (thrombin).
   
 0.719
PLG
LOW QUALITY PROTEIN: plasminogen.
   
 0.644
VTN
Vitronectin.
   
 0.607
SERPINC1
Serpin family C member 1.
  
0.590
FKBP10
Peptidyl-prolyl cis-trans isomerase FKBP10.
   
 
 0.576
ANGPTL4
Angiopoietin-related protein 4 isoform X1.
     
 0.572
PDGFC
Platelet derived growth factor C/D.
      
 0.563
ABHD5
1-acylglycerol-3-phosphate O-acyltransferase ABHD5 isoform X1.
   
  
 0.557
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.