STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAP30LHistone deacetylase complex subunit SAP30L. (283 aa)    
Predicted Functional Partners:
SAP30
LOW QUALITY PROTEIN: histone deacetylase complex subunit SAP30.
  
 
0.970
ARID4A
AT-rich interactive domain-containing protein 4A.
    
 0.968
ARID4B
AT-rich interactive domain-containing protein 4B isoform X1.
    
 0.968
SIN3A
LOW QUALITY PROTEIN: paired amphipathic helix protein Sin3a.
    
 0.950
HDAC2
Histone deacetylase 1/2.
    
 0.925
HDAC1
Histone deacetylase 1/2.
    
 0.925
RBPJ
Recombining binding protein suppressor of hairless isoform X1.
     
 0.914
RBPJL
LOW QUALITY PROTEIN: recombining binding protein suppressor of hairless-like protein.
     
 0.914
SUDS3
LOW QUALITY PROTEIN: sin3 histone deacetylase corepressor complex component SDS3.
   
 0.881
BRMS1
Breast cancer metastasis-suppressor 1 and related proteins.
   
 0.870
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.