STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPDC3Popeye domain containing 3. (289 aa)    
Predicted Functional Partners:
TBCCD1
LOW QUALITY PROTEIN: TBCC domain-containing protein 1.
      
 0.461
ICMT
Protein-S-isoprenylcysteine O-methyltransferase.
      
 0.435
TMEM161A
Transmembrane protein 161A isoform X1.
      
 0.429
BCKDHB
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial.
      
 0.406
GINS1
DNA replication complex GINS protein PSF1.
      
 0.406
TNFRSF9
Tumor necrosis factor receptor superfamily member 9.
      
 0.405
RHBDD1
Rhomboid-related protein 4 isoform X1.
    
 
 0.403
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.