STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPM4Tropomyosin alpha-4 chain isoform X1. (324 aa)    
Predicted Functional Partners:
ACTC1
Actin, alpha cardiac muscle 1.
   
 0.938
MYL1
Myosin light chain 1/3, skeletal muscle isoform isoform X1.
   
 0.783
TNNI2
Troponin I, fast skeletal muscle isoform X1.
   
 0.715
TNNI1
Troponin I, slow skeletal muscle.
   
 0.712
TNNT2
Troponin T2, cardiac type.
   
 0.693
TNNT1
Troponin T1, slow skeletal type.
   
 0.693
TNNT3
Troponin T, fast skeletal muscle.
   
 0.693
SMIM20
Small integral membrane protein 20.
   
 0.649
ENSPCIP00000042925
Small integral membrane protein 20-like.
   
 0.649
GATD1
Parkinson disease 7 domain-containing protein 1 isoform X1.
   
 0.614
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.