STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSXBrain-specific homeobox protein homolog. (233 aa)    
Predicted Functional Partners:
FEZF1
Fez family zinc finger protein 1 isoform X1.
   
 0.603
LHX4
LIM/homeobox protein Lhx4.
  
   
 0.512
ITPKA
1D-myo-inositol-triphosphate 3-kinase.
      
 0.506
TCF7L2
Transcription factor 7-like 2 isoform X1.
    
 0.501
ENSPCIP00000046349
annotation not available
    
 0.501
TCF7L1
Transcription factor 7 like 1.
    
 0.501
LEF1
Lymphoid enhancer-binding factor 1 isoform X1.
    
 0.501
DMRTA1
Doublesex- and mab-3-related transcription factor 4/5.
   
  
 0.491
LRP4
Low-density lipoprotein receptor-related protein 4 isoform X1.
      
 0.461
ENSPCIP00000003026
LOW QUALITY PROTEIN: sal-like protein 3.
   
 0.424
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.