STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ITGB4LOW QUALITY PROTEIN: integrin beta-4. (1809 aa)    
Predicted Functional Partners:
ITGA6
Integrin alpha-6 isoform X1.
   
 0.988
PTK2
Focal adhesion kinase 1 isoform X1.
   
 0.949
SRC
Proto-oncogene tyrosine-protein kinase Src isoform X1.
   
 0.938
ACTB
Actin, cytoplasmic 1.
    
 0.915
ACTG1
Actin, cytoplasmic 2.
    
 0.915
VASP
Vasodilator-stimulated phosphoprotein isoform X1.
   
 
 0.905
PLEC
LOW QUALITY PROTEIN: plectin.
  
 0.902
LAMB3
Laminin subunit beta-3.
   
 0.882
LAMC2
Laminin subunit gamma-2.
   
 0.879
DSP
Desmoplakin isoform X1.
   
 0.869
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.