STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HPCAL4Hippocalcin-like protein 4. (288 aa)    
Predicted Functional Partners:
PI4KB
Phosphatidylinositol 4-kinase beta isoform X1.
    
 
 0.732
CASK
Calcium/calmodulin-dependent serine protein kinase.
    
 0.678
LRGUK
Leucine-rich repeat and guanylate kinase domain-containing protein isoform X1.
   
 0.500
MAPT
Microtubule-associated protein tau isoform X1.
   
 
 0.495
ENSPCIP00000037886
annotation not available
    
 0.474
KCND3
Potassium voltage-gated channel Shal-related subfamily D member 3.
    
 0.474
KCND2
Potassium voltage-gated channel Shal-related subfamily D member 2.
    
 0.474
WDR90
WD repeat-containing protein 90.
    
 0.456
XPC
LOW QUALITY PROTEIN: DNA repair protein complementing XP-C cells.
    
 0.451
PPP3CC
Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform isoform X1.
   
 0.441
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (28%) [HD]