STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA3Replication protein A 14 kDa subunit. (120 aa)    
Predicted Functional Partners:
RPA1
Replication protein A 70 kDa DNA-binding subunit isoform X1.
   
 0.999
WRN
Werner syndrome ATP-dependent helicase.
    
 0.999
RPA2
Replication protein A 32 kDa subunit isoform X1.
   
 0.997
BLM
Bloom syndrome protein.
    
 0.996
TOP3A
DNA topoisomerase 3-alpha.
    
 0.996
RMI1
RecQ-mediated genome instability protein 1.
    
 0.996
TOP3B
DNA topoisomerase 3-beta-1 isoform X1.
    
 0.983
CLSPN
Claspin.
    
 0.972
B2M
Beta-2-microglobulin.
   
 0.972
RAD52
DNA repair protein RAD52 homolog isoform X1.
    
 0.972
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.