STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRDMT1TRNA (cytosine(38)-C(5))-methyltransferase isoform X1. (453 aa)    
Predicted Functional Partners:
NSUN2
TRNA (cytosine(34)-C(5))-methyltransferase.
   
  
 0.723
NSUN6
Putative methyltransferase NSUN6 isoform X1.
   
  
 0.657
QTRT1
Queuine tRNA-ribosyltransferase catalytic subunit 1.
      
 0.654
TM2D1
TM2 domain containing 1.
      
 0.612
ENSPCIP00000002238
annotation not available
   
  
 0.605
C2CD2
C2 domain-containing protein 2.
      
 0.600
NSUN5
Probable 28S rRNA (cytosine-C(5))-methyltransferase.
   
  
 0.582
ENSPCIP00000033394
annotation not available
      
 0.575
DNMT3B
DNA methyltransferase 3 beta.
      
 0.565
DNMT3L
DNA (cytosine-5)-methyltransferase 3-like.
      
 0.563
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.