STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFX5LOW QUALITY PROTEIN: DNA-binding protein RFX5. (598 aa)    
Predicted Functional Partners:
RFXAP
LOW QUALITY PROTEIN: regulatory factor X-associated protein.
    
 0.996
RFXANK
Regulatory factor X-associated ankyrin-containing protein.
   
 0.993
CIITA
MHC class II transactivator isoform X1.
    
 0.985
ENSPCIP00000049145
annotation not available
   
 
 0.936
ATR
LOW QUALITY PROTEIN: serine/threonine-protein kinase ATR.
    
 
 0.634
RFX8
DNA-binding protein RFX8 isoform X1.
      
 0.561
MED23
Mediator of RNA polymerase II transcription subunit 23 isoform X1.
      
 0.559
CRYZL1
Quinone oxidoreductase-like protein 1 isoform X1.
      
 0.552
CHEK2
Serine/threonine-protein kinase Chk2 isoform X1.
   
 
 0.547
NECTIN1
Poliovirus receptor-related protein 1.
      
 0.542
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.