STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PABPC4poly(A) binding protein cytoplasmic 4. (624 aa)    
Predicted Functional Partners:
PAN3
poly(A) specific ribonuclease subunit PAN3.
    
 0.762
PAN2
PAB-dependent poly(A)-specific ribonuclease subunit PAN2 isoform X1.
    
 0.757
PAIP1
LOW QUALITY PROTEIN: polyadenylate-binding protein-interacting protein 1.
   
 0.719
EIF4G1
Eukaryotic translation initiation factor 4 gamma 1 isoform X1.
   
 0.719
EIF4A1
Eukaryotic initiation factor 4A-I.
 
 
 0.718
EIF4A2
Eukaryotic initiation factor 4A-II isoform X1.
 
 
 0.717
EIF4G3
Eukaryotic translation initiation factor 4 gamma 3 isoform X1.
   
 0.695
ENSPCIP00000039761
annotation not available
   
 0.687
EIF4G2
Eukaryotic translation initiation factor 4 gamma 2.
   
 0.676
UPF1
LOW QUALITY PROTEIN: regulator of nonsense transcripts 1.
   
 0.672
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.