STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPBAR1LOW QUALITY PROTEIN: G-protein coupled bile acid receptor 1. (327 aa)    
Predicted Functional Partners:
ACTR2
Actin-related protein 2.
   
 0.983
ENSPCIP00000012438
annotation not available
   
 0.947
ENSPCIP00000019441
annotation not available
   
 0.947
ARPC3
Actin related protein 2/3 complex, subunit 3.
   
 0.947
ARPC4
Actin related protein 2/3 complex, subunit 4.
   
 0.947
NCKIPSD
LOW QUALITY PROTEIN: NCK-interacting protein with SH3 domain.
   
 0.943
ACTR3B
Actin-related protein 3B isoform X1.
   
 0.935
ACTR3
Actin-related protein 3.
   
 0.935
ARPC1A
LOW QUALITY PROTEIN: actin-related protein 2/3 complex subunit 1A.
   
 0.923
ARPC1B
Actin-related protein 2/3 complex subunit 1B isoform X1.
   
 0.923
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.