STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYCBP2E3 ubiquitin-protein ligase MYCBP2 isoform X1. (4589 aa)    
Predicted Functional Partners:
FBXO45
F-box/SPRY domain-containing protein 1.
    
 
 0.963
RAE1
MRNA export factor.
    
 
 0.777
SPSB3
SPRY domain-containing SOCS box protein 3 isoform X1.
    
 
 0.710
SPSB1
SPRY domain-containing SOCS box protein 1/4.
    
 
 0.710
SPSB4
SPRY domain-containing SOCS box protein 1/4.
    
 
 0.710
SPSB2
SPRY domain-containing SOCS box protein 2.
    
 
 0.710
HERC1
Probable E3 ubiquitin-protein ligase HERC1 isoform X1.
   
 
0.701
MAP3K13
LOW QUALITY PROTEIN: mitogen-activated protein kinase kinase kinase 13.
    
 
 0.655
MAP3K12
LOW QUALITY PROTEIN: mitogen-activated protein kinase kinase kinase 12.
    
 
 0.655
NRXN3
Neurexin 3.
      
 0.647
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.