STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFXAPLOW QUALITY PROTEIN: regulatory factor X-associated protein. (248 aa)    
Predicted Functional Partners:
RFX5
LOW QUALITY PROTEIN: DNA-binding protein RFX5.
    
 0.996
RFXANK
Regulatory factor X-associated ankyrin-containing protein.
    
 0.990
CIITA
MHC class II transactivator isoform X1.
     
 0.981
ENSPCIP00000049145
annotation not available
    
 
 0.736
RFX1
MHC class II regulatory factor RFX1 isoform X1.
    
 
 0.734
RFX7
LOW QUALITY PROTEIN: DNA-binding protein RFX7.
    
 
 0.620
ANKRA2
Ankyrin repeat family A protein 2 isoform X1.
    
 
 0.614
CREB1
Cyclic AMP-responsive element-binding protein 1 isoform X1.
      
 0.574
RD3L
Protein RD3-like.
      
 0.560
CDHR5
Cadherin-related family member 5.
      
 0.555
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.