STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSM14AProtein LSM14 homolog A isoform X1. (463 aa)    
Predicted Functional Partners:
DDX6
Probable ATP-dependent RNA helicase DDX6.
   
 
 0.975
EIF4ENIF1
Eukaryotic translation initiation factor 4E transporter isoform X1.
   
 
 0.947
DCP2
M7GpppN-mRNA hydrolase isoform X1.
   
 
 0.885
EDC3
Enhancer of mRNA-decapping protein 3.
    
 
 0.878
DCP1A
MRNA-decapping enzyme 1A.
    
 
 0.755
DCP1B
MRNA-decapping enzyme 1B isoform X1.
    
 
 0.745
EDC4
Enhancer of mRNA-decapping protein 4 isoform X1.
    
 
 0.684
LSM1
U6 snRNA-associated Sm-like protein LSm1 isoform X1.
    
 
 0.655
YBX2
LOW QUALITY PROTEIN: Y-box-binding protein 2.
   
 
 0.623
DDX10
Probable ATP-dependent RNA helicase DDX10.
   
 
 0.603
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.