STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRH2Peptidyl-tRNA hydrolase 2, mitochondrial. (186 aa)    
Predicted Functional Partners:
ERBIN
LOW QUALITY PROTEIN: erbin.
      
 0.626
BPTF
Nucleosome-remodeling factor subunit BPTF isoform X1.
      
 0.602
MRPL44
39S ribosomal protein L44, mitochondrial.
   
  
 0.573
USP30
Ubiquitin carboxyl-terminal hydrolase 30 isoform X1.
    
  0.570
ENSPCIP00000012090
Uncharacterized protein KIAA1107 homolog isoform X1.
      
 0.560
PARK7
Protein DJ-1.
   
  
 0.558
TRAPPC6B
Trafficking protein particle complex subunit 6B.
      
 0.558
SETD5
SET domain-containing protein 5 isoform X1.
      
 0.556
PTRH1
Probable peptidyl-tRNA hydrolase isoform X1.
      
 0.511
COX18
Mitochondrial inner membrane protein COX18 isoform X1.
      
 0.509
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.