STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHD8Chromodomain helicase DNA binding protein 8. (2581 aa)    
Predicted Functional Partners:
CTNNB1
LOW QUALITY PROTEIN: catenin beta-1.
    
 0.986
ADNP
Activity-dependent neuroprotector homeobox protein.
   
 
 0.692
BRD4
LOW QUALITY PROTEIN: bromodomain-containing protein 4.
   
 
 0.687
SSRP1
Structure-specific recognition protein 1.
   
 
 0.680
HMG20A
High mobility group protein 20A.
    
 0.641
CHD7
Chromodomain-helicase-DNA-binding protein 7 isoform X1.
  
 
 
0.632
DDX6
Probable ATP-dependent RNA helicase DDX6.
   
 0.629
SUPT16H
FACT complex subunit SPT16.
   
 
 0.627
ENSPCIP00000046034
annotation not available
    
 0.626
POGZ
Pogo transposable element with ZNF domain isoform X1.
   
 0.620
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.