STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRIF1Ligand-dependent nuclear receptor-interacting factor 1 isoform X1. (761 aa)    
Predicted Functional Partners:
SMCHD1
Structural maintenance of chromosomes flexible hinge domain-containing protein 1 isoform X1.
    
 
 0.640
RRP15
Ribosomal RNA processing 15 homolog.
      
 0.552
SDAD1
Protein SDA1 homolog.
      
 0.552
ZNF512
Zinc finger protein 512 isoform X1.
      
 0.551
RMND5A
E3 ubiquitin-protein transferase RMND5.
      
 0.533
HERC2
LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2-like.
      
 0.485
RANBP10
Ran-binding protein 10 isoform X1.
      
 0.481
CBX3
Chromobox protein homolog 3 isoform X1.
    
 
 0.474
ENSPCIP00000003821
annotation not available
      
 0.461
SRBD1
S1 RNA-binding domain-containing protein 1 isoform X1.
      
 0.432
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.