STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF2Lysine-specific demethylase PHF2. (1066 aa)    
Predicted Functional Partners:
ARID5B
AT-rich interactive domain-containing protein 5B isoform X1.
     
 0.809
SUV39H1
Histone-lysine N-methyltransferase SUV39H1 isoform X1.
    
 0.507
SUV39H2
Histone-lysine N-methyltransferase SUV39H2 isoform X1.
    
 0.507
CENPA
LOW QUALITY PROTEIN: histone H3-like centromeric protein A.
    
 0.496
ENSPCIP00000019250
annotation not available
    
 0.496
ENSPCIP00000020025
annotation not available
    
 0.496
ENSPCIP00000023014
Histone H3.3.
    
 0.496
ENSPCIP00000025912
annotation not available
    
 0.496
ENSPCIP00000027266
annotation not available
    
 0.496
ENSPCIP00000042028
LOW QUALITY PROTEIN: histone H3-like centromeric protein CSE4.
    
 0.496
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.