STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTS12A disintegrin and metalloproteinase with thrombospondin motifs 12 isoform X1. (1628 aa)    
Predicted Functional Partners:
COL3A1
Collagen alpha-1(III) chain isoform X1.
   
 0.505
COL4A2
Collagen alpha-2(IV) chain.
   
 0.499
NTN5
Netrin-5 isoform X1.
   
  
 0.481
BCL3
B-cell lymphoma 3 protein isoform X1.
   
  
 0.465
BPIFB1
BPI fold-containing family B member 1.
      
 0.461
TTR
Transthyretin.
      
 0.461
INO80D
INO80 complex subunit D isoform X1.
      
 0.461
TMEM216
Transmembrane protein 216 isoform X1.
      
 0.454
COMP
Cartilage oligomeric matrix protein.
    
 0.453
B3GLCT
UDP-glucose:O-linked fucose beta-1,3-glucosyltransferase.
    
 0.448
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.