STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ITGA6Integrin alpha-6 isoform X1. (1132 aa)    
Predicted Functional Partners:
ITGB1
Integrin beta-1 isoform X1.
   
 0.998
ITGB4
LOW QUALITY PROTEIN: integrin beta-4.
   
 0.988
LAMB1
Laminin subunit beta-1.
    
 0.956
PTK2
Focal adhesion kinase 1 isoform X1.
   
 0.951
LAMC1
Laminin subunit gamma-1.
   
 0.947
VASP
Vasodilator-stimulated phosphoprotein isoform X1.
     
 0.904
LAMA3
Laminin subunit alpha-3 isoform X1.
   
 0.903
LAMA4
Laminin subunit alpha-4 isoform X1.
   
 0.897
LAMA2
Laminin subunit alpha-2 isoform X1.
   
 0.837
LAMC2
Laminin subunit gamma-2.
   
 0.834
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.