STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRUReceptor-type tyrosine-protein phosphatase U isoform X1. (1563 aa)    
Predicted Functional Partners:
KIT
Mast/stem cell growth factor receptor Kit isoform X1.
    
 0.707
CSF1R
Macrophage colony-stimulating factor 1 receptor.
    
 0.580
PPM1M
LOW QUALITY PROTEIN: protein phosphatase 1M.
   
  
 0.565
MXRA8
Matrix remodeling-associated protein 8.
      
 0.512
ASB3
Ankyrin repeat and SOCS box containing 3.
    
 
 0.509
PTK7
Inactive tyrosine-protein kinase 7.
    
 0.509
NIPAL1
Magnesium transporter NIPA3.
      
 0.504
PTS
6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase.
    
 
 0.496
DHX37
LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DHX37.
   
 0.488
CTNNB1
LOW QUALITY PROTEIN: catenin beta-1.
    
 
 0.477
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.