STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDHBL-lactate dehydrogenase B chain. (334 aa)    
Predicted Functional Partners:
GOT2
LOW QUALITY PROTEIN: aspartate aminotransferase, mitochondrial.
   
 0.957
GOT1
Aspartate aminotransferase, cytoplasmic.
   
 0.956
PC
Pyruvate carboxylase, mitochondrial.
  
 0.949
PKM
Pyruvate kinase PKM isoform X1.
  
 0.946
PKLR
Pyruvate kinase PKLR isoform X1.
  
 0.946
GOT1L1
Putative aspartate aminotransferase, cytoplasmic 2 isoform X1.
   
 0.940
ME2
Malate dehydrogenase (oxaloacetate-decarboxylating).
  
 0.932
ME3
LOW QUALITY PROTEIN: NADP-dependent malic enzyme, mitochondrial.
  
 0.932
ME1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 0.932
BCKDHA
2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial isoform X1.
   
 
 0.925
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.