STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000030305annotation not available (74 aa)    
Predicted Functional Partners:
BARD1
LOW QUALITY PROTEIN: BRCA1-associated RING domain protein 1.
    
 0.964
NBN
Nibrin isoform X1.
    
 0.958
MRE11
LOW QUALITY PROTEIN: double-strand break repair protein MRE11.
   
 0.907
ENSPCIP00000051590
annotation not available
   
 0.898
BRCA1
Breast cancer type 1 susceptibility protein isoform X1.
   
 0.898
RAD50
DNA repair protein RAD50.
    
 0.874
EXO1
Exonuclease 1.
   
 0.857
SIRT6
LOW QUALITY PROTEIN: NAD-dependent protein deacetylase sirtuin-6.
    
 0.751
ANKRD31
Putative ankyrin repeat domain-containing protein 31.
    
 0.739
ANKRD12
LOW QUALITY PROTEIN: ankyrin repeat domain-containing protein 12.
    
 0.739
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.