STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYCP1Synaptonemal complex protein 1 isoform X1. (999 aa)    
Predicted Functional Partners:
REC8
Meiotic recombination protein REC8, animal type.
    
 0.788
SYCE2
Synaptonemal complex central element protein 2.
    
 0.762
TEX12
Testis-expressed sequence 12 protein.
     
 0.706
SYCE3
Synaptonemal complex central element protein 3.
    
 0.678
HORMAD2
HORMA domain containing 2.
   
 
 0.657
H2AX
Histone H2AX.
    
 0.650
SPO11
Meiotic recombination protein SPO11 isoform X1.
      
 0.648
STAG3
Cohesin subunit SA-3 isoform X1.
     
 0.596
RNF212
Probable E3 SUMO-protein ligase RNF212 isoform X1.
      
 0.562
SYCP2L
LOW QUALITY PROTEIN: synaptonemal complex protein 2-like.
     
 0.561
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.