STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMBRD2LMBR1 domain-containing protein 2 isoform X1. (678 aa)    
Predicted Functional Partners:
CAPSL
Calcyphosin-like protein isoform X1.
 
 
  
 0.697
DEPDC1B
DEP domain-containing protein 1B isoform X1.
   
  
 0.652
AP4E1
AP-4 complex subunit epsilon-1 isoform X1.
   
  
 0.580
ESF1
ESF1 homolog.
      
 0.579
PIGO
GPI ethanolamine phosphate transferase 3 isoform X1.
      
 0.563
HMG20B
High mobility group 20B.
      
 0.561
FAM214A
Protein FAM214A isoform X1.
      
 0.560
LYRM7
Complex III assembly factor LYRM7.
   
  
 0.553
CDC42SE2
CDC42 small effector protein 2.
      
 0.528
NDUFAF2
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2.
      
 0.526
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.