STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDGG/T mismatch-specific thymine DNA glycosylase isoform X1. (410 aa)    
Predicted Functional Partners:
SUMO1
Small ubiquitin-related modifier 1.
   
 0.934
ENSPCIP00000013837
annotation not available
   
 0.934
UNG
Uracil-DNA glycosylase isoform X1.
      
 0.793
APEX1
DNA-(apurinic or apyrimidinic site) lyase.
  
 
 0.791
CREBBP
LOW QUALITY PROTEIN: CREB-binding protein.
    
 
 0.790
UBE2I
SUMO-conjugating enzyme UBC9 isoform X1.
   
 0.762
MUTYH
A/G-specific adenine glycosylase.
     
 0.717
ADAT2
TRNA-specific adenosine deaminase 2 isoform X1.
   
  
 0.712
EP300
E1A binding protein p300.
    
 
 0.704
APEX2
DNA-(apurinic or apyrimidinic site) lyase 2.
  
 
 0.702
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.