STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APOEApolipoprotein E. (303 aa)    
Predicted Functional Partners:
LRP2
Low-density lipoprotein receptor-related protein 2 isoform X1.
    
 0.971
LRP1
Low-density lipoprotein receptor-related protein 1 (alpha-2-macroglobulin receptor).
    
 0.947
ENSPCIP00000030791
annotation not available
   
  
 0.922
APOC2
Apolipoprotein C-II.
    
 0.912
APOC3
Apolipoprotein C-III.
   
 
 0.901
APOB
Apolipoprotein B-100 isoform X1.
   
 0.886
ENSPCIP00000005717
annotation not available
   
 0.828
LPL
Lipoprotein lipase.
     
 0.812
APOA1
Apolipoprotein A-I.
   
 0.796
APOA4
Apolipoprotein A-IV isoform X1.
   
 0.796
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.