STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM115Transmembrane protein 115. (357 aa)    
Predicted Functional Partners:
MUL1
Mitochondrial ubiquitin ligase activator of NFKB 1.
   
    0.727
BET1
Blocked early in transport 1.
   
 
  0.555
TMEM208
Transmembrane protein 208.
      
 0.502
TMEM101
Transmembrane protein 101.
      
 0.502
ENSPCIP00000053366
annotation not available
   
  
 0.501
CAPZA1
Capping protein (actin filament) muscle Z-line, alpha.
   
 
  0.468
BET1L
Blocked early in transport 1.
   
 
  0.445
CAPZA3
Capping protein (actin filament) muscle Z-line, alpha.
   
 
  0.417
CAPZA2
Capping protein (actin filament) muscle Z-line, alpha.
   
 
  0.417
CYB561D2
Cytochrome b-561 domain containing protein 2.
      
 0.416
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.